Abstract Overexpression and characterisation of non-stereospecific haloacid Dehalogenase E (DehE) of Rhizobium sp

As. Pac. J. Mol. Biol. & Biotech., Dec 2004 Vol. 12, 15-20

Overexpression and characterisation of non-stereospecific haloacid Dehalogenase E (DehE) of Rhizobium sp.

Fahrul Z. Huyop1*, Tan Yea Yusn1, Marcella Ismail1, Roswanira Ab Wahab2 and Ronald A. Cooper3

1Biology Department, University Technology Malaysia, 81310 Skudai, Johor, Malaysia
2Chemistry Department, University Technology Malaysia, 81310 Skudai, Johor, Malaysia
3Biochemistry Department, University of Leicester, United Kingdom

*Author for Correspondence.
Biology Department, University Technology Malaysia, 81310 Skudai, Johor, Malaysia.
Tel: 07-55 34556; Fax: 07-556 6162;
E-mail: This email address is being protected from spambots. You need JavaScript enabled to view it.

Key words: dehalogenase, DehL, DehE, DehD, Rhizobium sp.

Abstract.
The Rhizobium sp. dehalogenase enzyme (DehE) produced by heterologous expression of the cloned gene in E.coli was purified and characterised. The Km, Kcat and the Specificity Constants were determined. The enzyme shows nonstereospecific and could act on D- and L- isomer of 2-chloropropionate. The derived amino acid sequence of DehE showed little identity to Pseudomonas putida 113 DL-DEX (39% homology) but there was significant identity to two other dehalogenases (DehI and DhlIV) – 72% homology, that act non-selectively on 2-chloropropionate. The amino acid sequence of dehE contains 4 cysteine residues but their involvement in the mechanism of catalysis is still unclear based on their end product configuration. The Km, Kcat and Specificity Constants values for brominated compound suggested that this compound is a better substrate for growth and for the DehE enzyme.

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Abstract In Vitro Micropropagation of the aquarium plant Ludwigia repens

As. Pac. J. Mol. Biol. & Biotech., Dec 2004 Vol. 12, 21-25

In Vitro Micropropagation of the aquarium plant Ludwigia repens

Meryem Öztürk1, Khalid Mahmood Khawar2, Hasan Hüseyin Atar1, Cengiz Sancak2 and Sebahattin Özcan2*

1Department of Fisheries, Faculty of Agriculture, University of Ankara, 06110 Diskapi, Ankara, Turkey
2Department of Field Crops, Faculty of Agriculture, University of Ankara, 06110 Diskapi, Ankara, Turkey

*Author for Correspondence.
Department of Field Crops, Faculty of Agriculture, University of Ankara, 06110 Diskapi, Ankara, Turkey.
Tel: +90-312-3179815; Fax: +90-312-3179815;
E-mail: This email address is being protected from spambots. You need JavaScript enabled to view it.

Key words: Ludwigia repens, micropropagation, thidiazuron (TDZ), 6-benzylaminopurine, and carry over effect

Abstract.
Apical meristems, first, second and third-fourth axillary buds of Ludwigia repens were cultured on Murashige and Skoog (MS) medium containing various concentrations of 6-benzylaminopurine (BAP), thidiazuron (TDZ) and α-naphthaleneacetic acid (NAA) for micropropagation. Micropropagation was best achieved from apical meristem on MS medium containing 0.05 mg dm-3 TDZ and 0.1 mg dm-3 NAA. It was noted that TDZ or BAP had inhibitory effect on shoot elongation, which was overcome by subculturing shoots on half-strength MS media without growth regulators after 4 weeks of culture. This also served as rooting media. Rooted plantlets were finally transferred to aquariums containing fresh water with 100% adaptation.

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Abstract PCR and ELISA-based virus surveys of banana, papaya and cucurbit crops in Vietnam

As. Pac. J. Mol. Biol. & Biotech., Dec 2004 Vol. 12, 27-32

PCR and ELISA-based virus surveys of banana, papaya and cucurbit crops in Vietnam

P. A. Revill1, C. V. Ha2, R. E. Lines1, K. E. Bell1, M. T. Vu2 and J. L. Dale1,*

1Plant Biotechnology Program, Science Research Centre, Queensland University of Technology, Brisbane, 4001, Australia.
2Plant Pathology Department, Hanoi Agriculture University, Gia Lam, Hanoi, Vietnam.<./i>

*Author for Correspondence.
Science Research Centre, Queensland University of Technology, Brisbane, 4001, Australia;
Tel: 0061-7-38642557; Fax: 0061-7- 38645100;
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Key words: BBTV, begomovirus, CMV, survey, PCR, PRSV.

Abstract.
Between 1998 and 2002, we conducted PCR-based plant virus disease surveys throughout Vietnam, on banana, papaya, and several cucurbit crops, namely pumpkin, cucumber, gourds and loofa. Banana bunchy top virus in banana and Papaya ringspot virus in both papaya and cucurbits were widespread. Squash leaf curl virus-Vietnam and Cucumber mosaic virus were also widespread, predominantly infecting pumpkin and cucumber respectively.

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Abstract Modulation of Major Histocompatibility Complex (MHC) Class I Heavy Chain Gene Expression by Naringenin in CellsThat Express Human Papillomavirus (HPV) E6 and E7 Genes

As. Pac. J. Mol. Biol. & Biotech., Dec 2004 Vol. 12, 33-38

Modulation of Major Histocompatibility Complex (MHC) Class I Heavy Chain Gene Expression by Naringenin in CellsThat Express Human Papillomavirus (HPV) E6 and E7 Genes

Yusof, R.,1*, Yong, H. Y.1, Mohd,M. A.2 and G. Eric Blair3

1Department of Molecular Medicine and 2Department of Pharmacology, Faculty of Medicine, University of Malaya, 50603 Kuala Lumpur, Malaysia
3School of Biochemistry and Molecular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom.

*Author for Correspondence.
Department of Molecular Medicine, Faculty of Medicine, University Malaya, 50603 Kuala Lumpur.
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Key words: MHC Class I, Papillomavirus, Expression, Naringenin.

Abstract.
This study describes the effect of Naringenin on major histocompatibility complex (MHC) class I heavy chain gene expression in the presence of low risk or high risk Human Papillomavirus (HPV) E6 and E7 genes. Northern blot analysis showed that, in the presence of Naringenin, steady-state levels of MHC class I heavy chain mRNA transcripts were elevated in rat fibroblast (3Y1) cells. In transient expression assays of MHC class I heavy chain (H-2Kb) promoter activity, it was observed that there was a down-regulation of MHC class I promoter activity in 3Y1 cells co-transfected with either high risk HPV 16 E6 and E7 or low risk HPV 6 E6 and E7 expression plasmids. Treatment of control 3Y1 cells and cells cotransfected with high or low risk HPV E6 and E7 plasmids with 300µg/ml of Naringenin for 24 hours led to an increase in H-2Kb-driven CAT (chloramphenicol acetyl transferase) reporter gene activity. Thus, Naringenin retained the ability to increase H-2Kb promoter activity in the presence of either E6 or E7 expression constructs, indicating that Naringenin can over-ride the transcriptional repressor effects of HPV oncoproteins and may therefore have some potential immunostimulatory properties in HPV-associated malignancy.

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Abstract Rapid Production of Lilium auratum Bulbs from Zygotic Embryos

As. Pac. J. Mol. Biol. & Biotech., Dec 2004 Vol. 12, 39-42

Rapid Production of Lilium auratum Bulbs from Zygotic Embryos

Takuo Furyuya1,3 and Koji Nomura1,2*

1Masters Programs of Biosystem Studies, University of Tsukuba, Tsukuba, Ibaraki 305-8572
2Institute of Agriculture and Forestry, University of Tsukuba, Tsukuba, Ibaraki 305-8572
3Present address: Ibaraki Prefectural Sashima Senior High School, Shasima, Ibaraki 306-0501

*Author for Correspondence.
Institute of Agriculture and forestry, University of Tsukuba, Ibaraki 305-8572.
Tel and Fax: +81-29-8536692;
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Key words: Lilium auratum Lindl, ovule culture, embryo culture, propagation, genetic diversity

Abstract.
An in vitro culture system for Lilium auratum Lindl. zygotic embryos was established to accelerate the development of bulblets. High rates of germination were observed on 50 days after pollination (DAP) or later, while the rate of normal growth increased after 70 DAP. Peeling of the seed coats was necessary for rapid in vitro germination, indicating inhibition by the seed coats. We found that embryos obtained from 90 DAP capsules were the best materials for suppressing dormancy. Further development of bulblets was accelerated by culturing them in the presence of 9 % sucrose. In this culture system, the period for development of mature bulblets was reduced from a couple of years to one year after pollination.

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