Abstract Evaluation of the Delivery Modes and Their Effects on the Antigenicity Properties of a Synthetic Multivalent Mycobacterial Gene in Mice

As. Pac. J. Mol. Biol. & Biotech., June 2007 Vol. 15, x-x

Evaluation of the Delivery Modes and Their Effects on the Antigenicity Properties of a Synthetic Multivalent Mycobacterial Gene in Mice

Chee-Mun Fang1, Zainul F. Zainuddin2, Mustaffa Musa3, Norazmi Mohd Nor2, Kwai-Lin Thong1*

1Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia.
2School of Health Sciences, Universiti Sains Malaysia, 16150 Kubang Kerian, Kelantan, Malaysia.
3Department of Immunology, School of Medical Sciences, Universiti Sains Malaysia, 16150 Kubang Kerian, Kelantan, Malaysia

*Author for Correspondence.
Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia.
Tel: 603-79674437; Fax: 603-79675908; E-mail: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
An ubiquitin conjugated multivalent mycobacterial gene vacIII (containing seven immunogenic mycobacterial epitopes or genes; esat-6 (P1), esat-6 (P2), phos1 (65-83), phos1 (129-137), phos1 (166-175), hsp 16.3 and mtb 8.4) was developed and packaged in different modes of antigen delivery systems including 1) DNA vaccination (pVaxVacIII), 2) oral vaccine strain Salmonella typhi Ty21a as a delivery vehicle for the DNA vaccine (StV3dvc) and 3) a recombinant S. typhi Ty21a (StV3) expressing the VacIII antigen on its surface using a synthetic version of the ice-nucleation protein (Inp) of Pseudomonas syringae. Immunization of C57BL/6 mice with pVaxVacIII elicited both humoral and cell-mediated responses although the overall effect tended to polar­ize towards the Th1 response (high IFN-γ and low IL-4). StV3dvc and StV3 (both of which were delivered orally) on the other hand triggered an immune response which polarized towards Th2. Thus the bacteria S. typhi Ty21a was able to modulate the immunological properties of the DNA vaccine candidate. In conclusion, the different delivery models altered the antigenicity properties of the synthetic multivalent mycobacterial gene. However, the level of immunity induced by different delivery models may be insufficient for protection against Mycobacterium infection.

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Abstract Analyses of Expressed Sequence Tags (ESTs) from Panicles of the indica Rice Cultivar MR84 during Grain Filling Stages and Molecular Characterisation of ADP-glucose Pyrophosphorylase Small Subunit

As. Pac. J. Mol. Biol. & Biotech., June 2007 Vol. 15, x-x

Analyses of Expressed Sequence Tags (ESTs) from Panicles of the indica Rice Cultivar MR84 during Grain Filling Stages and Molecular Characterisation of ADP-glucose Pyrophosphorylase Small Subunit

Yick-Ching Wong1, Chai-Ling Ho1*, Harikrishna Kulaveerasingam2, Abdullah Md. Zain3, Suhaimi Napis1 and Faridah Qamaruz Zaman4

1Department of Cell and Molecular Biology, Faculty of Biotechnology and Biomolecular Sciences,
  Universiti Putra Malaysia, 43400 UPM-Serdang, Selangor, Malaysia.
2Sime Darby Technology Centre Sdn. Bhd., 2, Jalan Tandang, 46050 Petaling Jaya, Selangor, Malaysia.
3Malaysian Agricultural Research and Development Institute (MARDI), PO Box 203, Kepala Batas, 13200 Seberang Prai, Penang, Malaysia.
4Department of Biology, Faculty of Science, Universiti Putra Malaysia, 43400 UPM-Serdang, Selangor, Malaysia.

*Author for Correspondence.
Department of Cell and Molecular Biology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, 43400 UPM-Serdang, Selangor, Malaysia.
T+6896775x+6Tel: +60 3 89467475;Fax:+60 3 89467510; Email:This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Rice grain filling is a critical factor that affects yield. In this study, we analyzed the transcripts from rice panicles of the indica rice cultivar MR84 during reproductive and grain filling stages by using expressed sequence tag (EST) approach. Subtractive hybridizations were conducted using three pools of mRNA encompassing panicle initiation, booting, heading, flow­ering, pollination, fertilization, early/mid and late grain developmental phases. A total of 2366 clones were obtained from these subtractive hybridizations and 718 of them were sequenced. Approximately 36% of the sequenced cDNAs from rice panicles during panicle initiation to heading encoded for pollen allergens, whereas, the remaining ESTs encoded proteins involved in metabolism, transportation, gene expression and other functions. Most of the ESTs from heading to milk stage were storage proteins or involve in metabolisms, whereas, majority of the gene sequences from milk stage to maturation encoded putative storage proteins (61 %) e.g. glutelins and prolamins. Starch is the main component of rice seed dry weight and its biosynthesis largely drives rice yield. Herein, a partial cDNA sequence (I-AGPS1) for the plastidial form of ADP-glucose pyrophosphory­lase small subunit, which is involved in the rate-limiting step of starch biosynthesis in higher plants, was isolated from MR84. This gene was preferentially expressed in the grains of milk and dough stage, but unlike its homolog from japonica cultivar, was undetected in rice leaves.

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Abstract Histochemical Localization of Polyphenol Oxidase and Peroxidase from Metroxylon sagu

As. Pac. J. Mol. Biol. & Biotech., June 2007 Vol. 15, x-x

Histochemical Localization of Polyphenol Oxidase and Peroxidase from Metroxylon sagu

Onsa G. H.1, Nazamid B. S.2*, Jinap S.2, Bakar J.2, Abdulkarim S. M.2 and Shamsul B.3

1Food Processing Research Center, Shambat, Khartoum, Sudan
2Faculty of Food Science and Technology, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia
3Biotechnology and Strategic Research Unit, Malaysia Rubber Board, 47000 Sg. Buloh, Selangor Malaysia.

*Author for Correspondence.
Dept. of Food Science, Faculty of Food Sci­ence and Technology, Universiti Putra Malaysia, 43400 UPM, Ser­dang, Selangor, Malaysia.
Tel:+603 89468371; Fax:+603-89423552; Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Polyphenol oxidase (PPO) and peroxidase (POD) activities were visualized histochemically at the cellular level of a young and a mature tree of Metroxylon sagu employing histochemical technique. In the mature tree, intense PPO activity was observed in the cell wall of the parenchyma and xylem cells when visualized under light microscope. Pith collected from the young tree showed PPO activity in the amyloplast and mitochondria inner membrane and to some extent in the golgi complex and endoplasmic reticulum. Whereas, a positive POD reaction product was visualized in the cell wall, peroxisomes and to some extent in the cytoplasm and the vacuole. The localization of PPO activity in the amyloplast and being adsorbed by the starch granules is in line with the general view that enzyme is involved in the browning of sago starch.

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Abstract Ammonium Uptake and Growth Kinetics of Pseudomonas putida PGA1

As. Pac. J. Mol. Biol. & Biotech., June 2006 Vol. 14, 1-10

Ammonium Uptake and Growth Kinetics of Pseudomonas putida PGA1.

Annuar, M.S.M1*, Tan, I.K.P2, Ibrahim, S3 and Ramachandran, K.B.4

1,2Institute of Biological Sciences, Faculty of Science, 3Department of Civil Engineering, University of Malaya, 50603 Kuala Lumpur, Malaysia
4Department of Biotechnology, Indian Institute of Technology (IIT) Madras, Chennai-600036, India

*Author for Correspondence.
Institute of Biological Sciences,
Faculty of Science,
University of Malaya,
Kuala Lumpur 50603, MALAYSIA.
Tel: 6-03- 7967-6740
Fax:6-03-7967-4178
E-mail:This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Ammonium uptake kinetics of low specific growth rate cultures of Pseudomonas putida PGA1, a gram negative fluorescent pseudomonad, which is an important producer of poly(3-hydroxyalkanoates) (PHA) molecules, were studied. The ammonium uptake follows a first-order kinetics model, indicating that the micro-organism’s specific uptake rate of ammonium and its growth would increase as the ammonium ion concentrations become higher. Optimal ammonium uptake and growth rates were observed at 0.1 gL-1 ammonium ion in aqueous medium. It also indicated that the ammonium transport mechanism is probably inducible by ammonium concentration. The limit of ammonium ion level increase before cells stop growing completely is given by the substrate inhibition constant, Ki which equals to 1.2 gL-1 ammonium ion concentration.

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Abstract Direct Regeneration and RAPD Assessment of Male Inflorescence Derived Plants of Musa acuminata cv. Berangan

As. Pac. J. Mol. Biol. & Biotech., June 2006 Vol. 14, 11-17

Direct Regeneration and RAPD Assessment of Male Inflorescence Derived Plants of Musa acuminata cv. Berangan

Asnita Abu Harirah and Norzulaani Khalid

Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia

*Author for Correspondence.
Institute of Biological Sciences,
Faculty of Science,
University of Malaya,
50603 Kuala Lumpur, Malaysia.
Tel: +603-79674380
Fax: +603-79-674-178
E-mail: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Regenerated plants were established using male inflorescence of Musa acuminata cv. Berangan. Explants were cultured on Murashige and Skoog (MS) solid medium supplemented with three different concentrations of 6- benzylaminopurine (BAP). After 2 weeks, whitish bud-like structures (WBLS) were obtained and MS media supplemented with 70.0 µM BAP was observed as the best media for the growth of WBLS. After 3 months, shoot-like structures emerged and MS media supplemented with 31.0 µM BAP gave a large number of shoot formation. Normal looking plantlets were obtained within 4 - 6 months with an average of 80 - 130 shoots regenerated from each male inflorescence. Random amplified polymorphic DNA (RAPD) was carried out to determine the clonal fidelity on in vitro Musa acuminata cv. Berangan micropropagated from male inflorescence derived from the same mother plant. Eighteen arbitrary decamer primers were used to amplify DNA from in vitro plants materials. All RAPD profiles from regenerated plants were monomorphic thus no somaclonal variation was detected. A total of 81 bands were scored from PCR amplification of genomic DNA from 15 micropropagated plants. This was further confirmed by the value of similarity index which was equaled to 1. This result implied that male inflorescence could be used as an alternative explant for commercial planting.

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