Abstract Isolation and characterization of a novel pistil predominant gene that binds weakly to the chitinase, Chi2;1 promoter of tomato

As. Pac. J. Mol. Biol. & Biotech., June 2006 Vol. 14, 19-26

Isolation and characterization of a novel pistil predominant gene that binds weakly to the chitinase, Chi2;1 promoter of tomato

Pick Kuen Chan1*, Hirzun Mohd Yusuf2, Clemente Michael Wong Vui Ling3 and Harikrishna Kulaveerasingam2

1Department of Biotechnology, Faculty of Food Science and Biotechnology,
Universiti Putra Malaysia, 43400 Serdang, Selangor Darul Ehsan, Malaysia.
2Sime Darby Technology Centre, 2 Jalan Tandang, 45060, Petaling Jaya,
Selangor Darul Ehsan, Malaysia.
3Biotechnology Research Institute, Universiti Malaysia Sabah,
88999 Kota Kinabalu, Sabah, Malaysia.

*Author for Correspondence.
Australia Research Council,
Centre of Excellence for Integrative Legume Research,
The University of Queensland,
4072 Brisbane, Australia.
Tel: +61 7 3365 4436
Fax: +61 7 3365 3556
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
A gene LN2-1-1 identified by screening a tomato pistil cDNA library has been found to encode a basic protein containing ankryin repeats. This clone was isolated by its binding ability to a specific DNA fragment in the tomato floral chitinase promoter using a yeast one hybrid system. An analysis of the temporal and spatial patterns of gene expression through northern blotting has demonstrated the highest level of expression in mature tomato pistils. In situ hybridization revealed that the mRNA was maximal on the upper half of the style and decreased in a gradient from the top to the lower half of the style. Hybridization was also detected on the stigma, ovules and ovary walls. The LN2-1-1 could possibly play a role in modulating the defense mechanism of tomato flowers based on its ability to bind to the chitinase, Chi 2;1 promoter.

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Abstract The Operation Performance of an Expanded Bed Contactor Characterised by Mechanical Stirring

As. Pac. J. Mol. Biol. & Biotech., June 2006 Vol. 14, 27-31

The Operation Performance of an Expanded Bed Contactor Characterised by Mechanical Stirring

Tau Chuan Ling1,2* , John Chi Wei Lan1,3 and Andrew Lyddiatt1,4

1Biochemical Recovery Group, Department of Chemical Engineering, School of Engineering,
University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK
2Department of Process and Food Engineering, Faculty of Engineering,
Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia.
3Biomass Laboratory, Energy and Resources Laboratories,
Industrial Technology Research Institute, Hsin-Chu (310), Taiwan.
4Millipore Biopharmaceutical Division, Bioprocessing Ltd, Medomsley Road, Consett DH8 6SZ, United Kingdom.

*Author for Correspondence.
Department of Process and Food Engineering,
Faculty of Engineering,
Universiti Putra Malaysia,
43400 UPM, Serdang, Selangor Malaysia.
Tel: +603 - 89466360
Fax: +603 - 86567123
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
The performance of an expanded bed contactor (UpFront i.d. 20 mm) characterised by mechanical stirring flow distribution in the adsorption of intracellular proteins from concentrated unclarified yeast extract was investigated. High density pellicular adsorbent (UpFront steel-agarose; ρ = 2.65 g ml-1) derivatized with selective ligand chemistries (Cibacron Blue 3GA) was adopted in this study. The adsorption of glyceraldehyde 3-phosphate dehydrogenase (G3PDH) from bakers’ yeast was chosen as a demonstration of this approach. It was demonstrated that a high biomass throughput adsorption operation (25 % ww/v of yeast extract) was achieved in this contactor design.

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Abstract Uncovering Factors Influencing Malaysian Public Attitude Towards Modern Biotechnology

As. Pac. J. Mol. Biol. & Biotech., Dec 2006 Vol. 14, 33-39

Uncovering Factors Influencing Malaysian Public Attitude Towards Modern Biotechnology

Latifah Amin1*, Jamaluddin Md. Jahi2, Abdul Rahim Md. Nor3, Mohamad Osman4 & Nor Muhammad Mahadi4

1Centre for General Studies, 2Centre for Graduate Studies, 3Faculty of Social Sciences & Humanities, 4Faculty of Science and Technology,
Universiti Kebangsaan Malaysia, 43600 UKM, Bangi, Selangor Darul Ehsan.

*Author for Correspondence.
Centre for General Studies
Universiti Kebangsaan Malaysia,
43600 UKM, Bangi, Selangor Darul Ehsan.
Tel: 603-89216907
E-mail: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Modern biotechnology has been classified as a complex emerging issue that exhibits high salience combined with limited knowledge on part of the public. It has been suggested by social scientists that any complex object may be located in a variety of general classes where its evaluation may be strongly affected by extraneous concerns. The purpose of this paper is to analyse the relationship between several general classes of attitudes and attitude towards genetically modified soybean as an example of modern biotechnology product available in Malaysia. A survey was carried out on 991 respondents from various interest groups in the Klang Valley region. Results of the survey have confirmed that attitude towards complex issues such as biotechnology should be seen as a multi-faceted/multidimensional process. The most important factors predicting encouragement of GM soybean are the specific application-linked perceptions about the benefits, acceptance of risk and moral concern while risk and familiarity are significant predictors of benefit and risk acceptance. Attitude towards GM soybean is also predicted by several general classes of attitude such as general promise and concern of biotechnology, technology optimism, nature/materialistic value, predisposition towards Science and Technology, attachment to religion and custom. Researchers, policy makers and industries interested in developing and marketing GM products in Malaysia should consider the various factors mentioned in this study in order to gain public approval.

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Abstract The Periplasmic Expression of Recombinant Human Epidermal Growth Factor (hEGF) in Escherichia coli

As. Pac. J. Mol. Biol. & Biotech., Dec 2006 Vol. 14, 41-45

The Periplasmic Expression of Recombinant Human Epidermal Growth Factor (hEGF) in Escherichia coli

Ahmad Faizal Abdull Razis1, Elysha Nur Ismail1, Zarida Hambali2, Muhammad Nazrul Hakim Abdullah2, Abdul Manaf Ali3, Mohd Azmi Mohd Lila4

1Laboratory of Immunotherapeutic and Vaccines, Institute of Bioscience, UPM
2Faculty of Medicine and Health Sciences, UPM
3Faculty of Biotechnology and Biomolecular Sciences, UPM
4Faculty of Veterinary Medicine, UPM.

*Author for Correspondence.
Laboratory of Immunotherapeutic and Vaccines,
Institute of Bioscience, 43400
Universiti Putra Malaysia
Serdang, Selangor MALAYSIA
Tel:+603-89464194/+6017-3484844
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Expression of recombinant eukaryotic proteins in Escherichia coli often results in the formation of inclusion bodies. In the case of disulfide-bonded proteins such as hEGF, inclusion body formation can be anticipated if the protein is produced in the bacterial cytosol. The consequence is improper folding which results in aggregation. Proper folding and solubility of such protein are pre-requisite for its biological activity. This is not achieved in cytoplasmic expression in E. coli because of the absence of disulfide bonds formation. The human epidermal growth factor (hEGF) gene has been cloned into the pFLAG fusion protein expression vector. The expression system used OmpA signal sequence to translocate processed and soluble proteins into the periplasm of E. coli cells. Molecular weight of secreted hEGF into periplasmic space was found approximately 6.8 kDa, similar size to the original protein which confirmed by SDS-PAGE and western blotting analysis. The findings obtained, showed in favor of periplasmic expression system, which may be suitable to produce the small eukaryotic disulfide-bonded proteins like hEGF.

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Abstract Analysis of tissue culture-derived regenerants using methylation sensitive AFLP

As. Pac. J. Mol. Biol. & Biotech., Dec 2006 Vol. 14, 47-55

Analysis of tissue culture-derived regenerants using methylation sensitive AFLP

Rajinder Singh*, Cheong Peck Lei, Koh Shu Jiun, and Cheah Suan Choo

Malaysia Palm Oil Board (MPOB), Headquarters, 6 Persiaran Institusi, Bandar Baru Bangi, 43000 Kajang, Selangor.

*Author for Correspondence.
Advanced Biotechnology & Breeding Centre
Malaysia Palm Oil Board (MPOB) Headquarters,
6 Persiaran Institusi Bandar Baru Bangi
43000 Kajang,Selangor.
Tel: 03-87694501
Fax: 03-89261995
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Tissue culture-derived plants of oil palm (Elaeis guineensis) can develop abnormal flowers in which stamen primordia are converted into carpel-like tissues. This often gives rise to abnormal fruits which are said to be ‘mantled’. Individual palms showing variation in mantling and reversion to the normal phenotype over time have been observed. Four ortets and their individual ramets were compared using methylation-sensitive amplification polymorphism (MSAP). Polymorphisms were observed with all methylation-sensitive restriction endonucleases with HpaII giving the highest number of polymorphic bands (0.62%) followed by MspI (0.48%) and PstI (0.19%). Polymorphisms detected were associated with both the mantled characteristic and tissue culture changes. Comparison between HpaII and MspI generated banding patterns showed the occurrence of hypomethylation, hypermethylation, hemi-methylation and change of methylation site, suggesting that the mantling phenotype was not caused by loss of methylation only. In fact, the occurrence of hypermethylation (46.7%) in this study is higher than hypomethylation (32.7%). From the results, it was also clear that the mantled abnormality was not caused by major changes in the genome during tissue culture. The mantled phenomenon was most likely associated with changes in methylation of specific loci. However, no consistent polymorphism was observed between the different sets of normal and abnormal ramets. This suggests that, whilst this method is an effective way of detecting variation in tissue culture-derived plants, it cannot identify the causal basis of the mantled fruit abnormality.

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