Abstract Non isotopic PCR cold SSCP of p53 gene mutations in gliomas using the Dcode system

As. Pac. J. Mol. Biol. & Biotech., Dec 2001 Vol. 9(2) : 107-110

Non isotopic PCR cold SSCP of p53 gene mutations in gliomas using the Dcode system

M.N. Isa1*, A.A. Yusoff1, M.R. Sidek1 and J.M. Abdullah2

1Human Genome Centre, Health Campus, 2Neuroscience Unit, School of Medical Sciences, Health Campus,
Universiti Sains Malaysia, 16150 Kubang Kerian, Kelantan, Malaysia

Received 8 June 2001 / Accepted 16 November 2001

Abstract.
The p53 tumor suppressor gene is the most commonly mutated gene identified in human cancers. The abnormal changes of this gene could be detected by several methods. In the present study, we have developed a procedure for non isotopic PCR cold SSCP using the Dcode Universal Mutation Detection System and applied it to the detection of p53 gene mutations in 33 Malaysian patients with surgically removed gliomas tissues. Our research showed that the optimum buffer temperature for 'cold' SSCP analysis was 10oC and highly specific for the PCR products between 100-250 bp. Mutations of the p53 gene were detected in 11 cases (33%) of 33 surgical specimens of gliomas. Additionally, p53 mutations occurred most frequently at exon 7 (45.5%), followed by exon 8 (36.4%) and exon 6 (18. 1 %). Our results indicate that the utility of the non isotopic PCR cold SSCP is a convenient, rapid and sensitive screening assay for detecting p53 gene mutations

Keywords: p53 gene, gliomas, Dcode, cold SSCP

Abstract Programmed cell death an overview of apoptosis in cell culture

As. Pac. J. Mol. Biol. & Biotech., Dec 2001 Vol. 9(2) : 79-106

Programmed cell death an overview of apoptosis in cell culture

B. T. Tey1, R. P. Singh2 and M. Al Rubeai3

Centre for Bioprocess Engineering, School of Chemical Engineering, University of Birmingham, Edgbaston,
Birmingham, B 15 2TT, UK.
1Department of Chemical and Environmental Engineering, Faculty ofEngineering,
Universiti Putra Malaysia, 43400 UPM, Serdang, Selangor, Malaysia
2Lonza Biologic Plc, 228, Bath Road, Slough, Berkshire, SL1 4DY, UK

Received 28 February 2001 /Accepted 15 March 2001

Abstract.
The importance of programmed cell death or apoptosis during the cultivation of animal cell lines is becoming increasingly apparent. Because apoptosis contributes to a diverse variety of adverse and undesirable processes, understanding its regulatory control might provide insight into the mechanism of these conditions and suggest novel strategies to improve cell viability and productivity. In this review we describe the morphological and biochemical characteristics of the two distinct forms of cell death (apoptosis and necrosis) and the common techniques used to identify them. The mechanisms involved in apoptosis and its regulation at the molecular level aswell as the involvement and role of factors that appear to participate in the apoptotic process are also described. We also discuss progress on the development of novel solutions to improve culture productivity through the apoptotic route with illustrations of practical applications from the authors' own research.

Keywords: Apoptosis, programmed cell death, cell culture, biotechnology, bioreactor, survival gene

Abstract Comparision of a dipstick colloidal dye immunoassay with sandwich elisa for the detection of circulating antigens in patients infected with Brugia malayi

As. Pac. J. Mol. Biol. & Biotech., Dec 2001 Vol 9(1) : 75-78

Comparision of a dipstick colloidal dye immunoassay with sandwich elisa for the detection of circulating antigens in patients infected with Brugia malayi.

Wan Omar Abdullah*, Sulaiman Osman1, Abdul Manaf Ali2, Yusof Suboh1
and Low Kiat Cheong1

Department of Clinical Laboratory Sciences, Faculty of Medicine and Health Sciences, Universiti Putra
Malaysia, 43400 UPM Serdang, Selangor; 1Department of Parasitology and Medical Entomology,
Faculty of Medicine, Universiti Kebangsaan Malaysia, Jalan Raja Muda Abdul Aziz,
50300 Kuala Lumpur1 ; 2Department of Biotechnology, Faculty of Food Sciences and Biotechnology,
Universiti Putra Malaysia, 43400 UPM Serdang, Selangor

(Received 10 March 2000 / Accepted 18 February 2001)

Abstract.
The performance of a newly developed dipstick colloidal dye immunoassay (DIA) was compared with that of a previously described Sandwich ELISA to detect parasite antigens in sera from patients with brugian filariasis. The rabbit polyclonal antibodies (RbBmCAg) and the same patients' sera were used in both the tests. In the DIA, 69 of 70 sera from well characterized microfilaremic patients were deemed to contain filarial antigens when screened at a dilution of 1:50. End titres were 1: 10 to 1280. The specificity of both assays was >95% but their sentivity was remarkably different. We have used 6 µl of the RbBmCAg per dipstick in comparision to 150 ?l per well for Sandwich ELISA. The DIA is a rapid test and can be read in approximate 2 h. In addition, coloured dots developed in the DIA can be qualitatively assessed visually for intensity. The DIA does not require sophisticated equipment or radioactivity, and is therefore suitable for field application.

Keywords: Dipstick, Colloidal Dye, Immunoassay, Filariasis

Abstract Identification of molecular markers in sago palm (Metroxylon sagu) using polymerase chain reaction

As. Pac. J. Mol. Biol. & Biotech., Dec 2001 Vol. 9(1) :71-74

Identification of molecular markers in sago palm (Metroxylon sagu) using polymerase chain reaction

B. Jamel, M. Morshidi and M. A. Salleh*

Molecular Biology and Biotechnology Laboratory, Faculty of Resource Science and Technology, Universiti Malaysia Sarawak,94300 Kota Samarahan, Sarawak, Malaysia.

(Received 12 June 1998 / Accepted 12 December 2000)

Abstract.
Genomic DNA from sago palm was isolated using the cetyltrimethlammoniurn bromide (CTAB) method with some modifications. The RAPD technique, employing ten base synthetic oligonucleotides, was used to generate molecular markers for this tropical palm. Successful amplification of the sago genomic DNA was also obtained using a microsatellite sequence (GATA)4, These molecular markers will be potentially useful for genetic fingerprinting of sago palm for future breeding programmes.

Keywords: Sago palm, Molecular Markers, RAPD

Abstract Synthesis of medium chain glycerides from caprylic acid and glycerol using lipase from Candida rugosa

As. Pac. J. Mol. Biol. & Biotech., Dec 2001 Vol. 9(1) :67-70

Synthesis of medium chain glycerides from caprylic acid and glycerol using lipase from Candida rugosa

M. Basril1*, N. Ngah1, M.B. Abd. Rahman1, R.N.Z. Abd. Rahman2, C. N. A. Razak 2,
and A. B. Salleh2

1Jabatan Kimia, 2Jabatan Biokimia dan Mikrobiologi, Fakulti Sains & Pengajian Alam Sekitar Universiti
Putra Malaysia, 43400 UPM Serdang, Malaysia.

(Received 12 December 2000 / Accepted 10 April 2001)

Abstract.
Enzymatic synthesis of medium chain glycerides (MCG) from caprylic acid and glycerol was studied using lipase from Candida rugosa. The effects of various reaction parameters such as time course, type of organic solvents, molar ratio of substrates (mmol glycerol/mmol capric acid), amount of enzyme, and initial water activity (aw) were studied. The best condition tested for MCG synthesis at 37oC were respectively, at time, 24 h: molar ratio of substrates, 0.4 and amount of enzyme, 100.0 mg. Generally, the activity of lipase was high in non polar solvents with log P values from 3.60 to 5.60. The enzymatic synthesis of MCG was preferably carried out at an initial aw of 0.328, which resulted in maximum yield. Analysis of the products of reaction using gas chromatography showed that lipase from Candida rugosa seemed to produce only dicaprylin and tricaprylin.

Keywords: medium chain glycerides, lipase, esterification, solvents, water activity

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