Abstract Transgenic Plants Producing Polyhydroxyalkanoates

As. Pac. J. Mol. Biol. & Biotech., Jan 2008 Vol. 16, 1-10

MINIREVIEW

Transgenic Plants Producing Polyhydroxyalkanoates


Abdul Masani Mat Yunus1, Ghulam Kadir Ahmad Parveez1 and Chai-Ling Ho2

1Advanced Biotechnology and Breeding Centre (ABBC), Malaysian Palm Oil Board (MPOB), P.O. Box 10620, 50720 Kuala Lumpur, Malaysia.
2Department of Cell and Molecular Biology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, 43400 Serdang, Selangor, Malaysia.

*Author for Correspondence.
Advanced Biotechnology and Breeding Centre,
Malaysian Palm Oil Board, P.O. Box 10620,
50720 Kuala Lumpur, Malaysia.
Tel: 603-89255846; Fax: 603-8259446;
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Currently, the polyhydroxybutyrate (PHB) copolymer, polyhydroxy-co-valerate (PHBV) is being produced commercially using a two-stage glucose / propionate fed batch fermentation process using Ralstonia eutropha. The economics of the manufacturing process are still a major barrier to the widespread use of polyhydroxyalkanoates (PHAs) and intensive efforts are being made to reduce the cost of production by means of bioprocess design and metabolic engineering of production strains. However, despite these improvements, the production costs are still high compared to petroleum-derived commodity plastics. An alternative strategy for lowering production costs that has been proposed is to develop transgenic plants that produce PHAs. This strategy is considerably cheaper because the PHAs production from plants does not require expensive fermentation equipment and processing facilities.

[Get pdf]

Abstract Evaluation of nitrogen sources for growth and production of medium-chain-length poly-(3-hydroxyalkanoates) from palm kernel oil by Pseudomonas putida PGA1

As. Pac. J. Mol. Biol. & Biotech., Jan 2008 Vol. 16, 11-15

RESEARCH NOTE

Evaluation of nitrogen sources for growth and production of medium-chain-length poly-(3-hydroxyalkanoates) from palm kernel oil by Pseudomonas putida PGA1


Annuar, M.S.M1,*, Irene K.P.Tan1 and K.B. Ramachandran2

1Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia
2Department of Biotechnology, Indian Institute of Technology (IIT) Madras, Chennai-600036, India

*Author for Correspondence.
Institute of Biological Sciences, Faculty of Science,
University of Malaya,
50603 Kuala Lumpur, Malaysia.
Tel: 603-7967-6740; Fax: 603-7967-4178;
E-mail: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Selected organic and inorganic nitrogen sources were evaluated for growth of Pseudomonas putida PGA1 and its production of medium-chain-length poly-(3-hydroxyalkanoates) (PHAMCL). The effect of these nitrogen sources on the cells growth, PHAMCL yield, monomer composition and molecular weight when this bacterium was cultivated on saponified palm kernel oil (SPKO) as the major carbon source was investigated. It was found that bacto-peptone gave significantly higher yield of residual biomass (PHA-free biomass) and PHAMCL as compared to ammonium salt, urea, yeast extract and beef extract. No significant difference in the monomer composition of the PHAMCL produced was observed with the different nitrogen sources. All the PHAMCL produced had high molecular weight, with the weight average (Mw) ranging from 90,000 to 127,000 and polydispersities (Mw/Mn) ranging from 1.7 to 1.9.

[Get pdf]

Abstract RT-PCR Amplification and Cloning of Partial DNA Sequence Coding for Oil Palm (Elaeis oleifera) Phytoene Synthase Gene

As. Pac. J. Mol. Biol. & Biotech., Jan 2008 Vol. 16, 17-24

RT-PCR Amplification and Cloning of Partial DNA Sequence Coding for Oil Palm (Elaeis oleifera) Phytoene Synthase Gene

O A Rasid1*, W S Wan Nur Syuhada2, A Nor Hanin1, S S Masura1, M Zulqarnain2, C L Ho3, N Suhaimi3 and R Sambanthamurthi1

1Malaysian Palm Oil Board, No 6 Persiaran Institusi, Bandar Baru Bangi 43000, Kajang, Selangor, Malaysia
2Department of Genetics and Molecular of Biology, Institute of Biological Sciences, University of Malaya, 50603 Kuala Lumpur, Malaysia
3Faculty of Biotechnology and Biomolecular Sciences, 43400 UPM Serdang, Selangor, Malaysia.

*Author for Correspondence.
Malaysian Palm Oil Board,
No 6 Persiaran Institusi, Bandar Baru Bangi
43000, Kajang, Selangor, Malaysia.
Tel: 603-87694585. Fax: 603-89261995.
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
The potential health benefits of carotenoids as anti cancer and antioxidant agents have recently been demonstrated. Oil palm, Elaeis oleifera in particular, is known to be the richest natural source for carotene. However, the species has not been commercially exploited due to its extremely low oil yield. The current work describes the isolation of a cDNA clone coding for phytoene synthase (psy) from E. oleifera by RT-PCR amplification. A pair of psy gene specific primers was successfully used to amplify a 899 bp fragment that codes for a partial length (300 amino acids) of oil palm psy. The DNA and amino acid sequences were shown to share a high level of identity to phytoene synthase from other plants at about 83%. Further analysis also showed the presence of conserved aspartate-rich catalytic domains within the clone. Work was also carried out to obtain the expression pattern of oil palm psy in developing fruits by real-time PCR analysis. Results indicated that the gene is highly regulated during the course of oil palm fruit development. The pattern of psy expression was shown to be well correlated to the accumulation of lutein in the young mesocarp and α- and β-carotenes in the older tissues. This observation demonstrated that oil palm psy was highly regulated for tissue development and accumulation of carotenes for storage.

[Get pdf]

Abstract Efficient regeneration and Agrobacterium tumefaciens mediated transformation of recalcitrant sweet potato (Ipomoea batatas L.) cultivars

As. Pac. J. Mol. Biol. & Biotech., June 2008 Vol. 16, 25-33

Efficient regeneration and Agrobacterium tumefaciens mediated transformation of recalcitrant sweet potato (Ipomoea batatas L.) cultivars

Rolando García González1,2*, Danalay Somonte Sánchez2, Zurima Zaldúa Guerra1, Jesús Mena Campos2, Alina López Quesada2, Rolando Morán Valdivia2, Ariel D. Arencibia2, Karla Quiroz Bravo³ and Peter DS. Caligari3

1Departamento de Ciencias Agrarias y Forestales, Universidad Católica del Maule, Chile. Avenida San Miguel, No.3605.
2Centro de Ingeniería Genética y Biotecnología de Camagüey. A.P. 387, C.P. 70100. Camagüey, Cuba.
3Instituto de Biología Vegetal y Biotecnología, Universidad de Talca. 2 Norte 685, Talca, Chile.

*Author for Correspondence.
Departamento de Ciencias Agrarias y Forestales,
Universidad Católica del Maule, Chile.
Avenida San Miguel, No.3605.

E-mail: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
Sweet potato is a major world crop and its behavior under in vitro culture is genotype dependent. We study several factors influencing the regeneration and transformation efficiency of two recalcitrant cultivars: Jewel and CEMSA 78354. Growth regulators, explant preparation and removal of apical dominance were evaluated in order to optimize the regeneration steps. At the same time, the influence of environmental conditions for the interaction between Agrobacterium tumefaciens and leaves were evaluated to obtain higher transformation efficiencies.
For Jewel, the best results were obtained when intact leaf explants were cultivated on MS medium supplemented with 0.5 mgL-1 indol-3-acetic acid for four weeks (Regeneration frequency, RF= 2.02). However, for CEMSA 78354 the best results were obtained by culturing leaf explants on MS medium supplemented with 1.0 mgL-1 paclobutrazol and 1.0 mgL-1 naftalenacetic acid (RF= 0.98).
Optimal transformation conditions were obtained for both cultivars by co-cultivating leaf explants with Agrobacterium tumefaciens in liquid MS medium for 24 hours at 28°C in stationary cultures in the dark. Acetosyringone influence on the transformation efficiency was found to be dependent on the co-cultivation temperature but it did not increase the transformation efficiencies. Molecular evidences by PCR, Southern blot and Dot blot demonstrated the effectiveness of the transformation procedure. The protocol described here is currently in use to produce transgenic sweet potatoes from different cultivars with high efficiency.

[Get pdf]

Abstract Isolation of High Molecular Weight DNA from Forest Topsoil for Metagenomic Analysis

As. Pac. J. Mol. Biol. & Biotech., June 2008 Vol. 16, 35-41

Isolation of High Molecular Weight DNA from Forest Topsoil for Metagenomic Analysis

Mei-Fong Pang, Noorlidah Abdullah, Choon-Weng Lee and Ching-Ching Ng*

Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia.

*Author for Correspondence.
Tel: +60-(0)3-79675872;
Fax: +60-(0)3-79675908;
Email: This email address is being protected from spambots. You need JavaScript enabled to view it.

Abstract.
In this study, we employed a modified method to extract DNA from forest topsoil that was suitable for construction of large insert soil metagenomic library. The DNA extraction method used produced considerable DNA yield with DNA fragments ranging from 48 kb up to 290 kb. The recovery of soil DNA suitable for PCR and metagenomic library construction is difficult because soil DNA is often co-purified with polyphenolics and contaminants that interfere with the downstream applications.
PCR amplification of 16S and fungal 18S SSU rRNA genes from the extracted soil DNA suggesting that the DNA isolated using this modified method contained low concentration of PCR inhibitory substances and had sufficient purity for PCR without the need of further purification. Sequence analysis of PCR amplicons revealed this extraction method can efficiently capture a wide range of microorganisms including the hard-to-lyse Gram-positive bacteria and fungi. We have also successfully constructed a metagenomic fosmid library with insert size of between 23.1 kb – 40 kb. This metagenomic library will serve as basis for screening of novel biocatalysts from the soil metagenome.

[Get pdf]

Sponsors Members

  • image
  • image
  • image
  • 1

About MSMBB

We are a non-profit organisation that was established in 1988 to promote molecular biology and biotechnology.

Stay Connected on:

Contact Us

For general information about MSMBB, including registration, please contact us at:

  Department of Parasitology,
Faculty of Medicine,
University of Malaya,
50603 Kuala Lumpur,
Malaysia.
  This email address is being protected from spambots. You need JavaScript enabled to view it.
  +603 - 7967 4744
  +603 - 7967 4749