Abstract Sequence comparison of coat protein and 3' non translated region of papaya ringspot virus isolates from Thailand

As. Pac. J. Mol. Biol. & Biotech., Dec 1998 Vol. 6(2) : 191-198

Sequence comparison of coat protein and 3' non translated region of papaya ringspot virus isolates from Thailand

Sunee Kertbundit*, Pongsopee Attasart, Sakol Panyirn and Milajuricek

Institute of Molecular Biology and Genetics, Mahidol University, Salaya Campus, Nakhon Pathom 73170, Thailand

(Received 24 June 1998 / Accepted 12 October 1998)

Abstract.
The coat protein gene and most of the 3' non translated region of ten isolates of papaya ringspot virus (PRSV) were sequenced. Although there was up to 13% variation when these isolates were compared with published sequences of PRSV, less then 5% difference was observed among the coat proteins and the 3'non translated region (NTR) of Thai isolates indicating that all isolates have the same origin. Two isolates, propagated under laboratory conditions, showed greater homology with isolates from China and Taiwan than with the original one from Thailand.

Keywords: sequence comparison, coat protein, 3' non translated region, papaya ringspot virus

Abstract Decolorization of kesinai (Streblus asper) leaf extract

As. Pac. J. Mol. Biol. & Biotech., Dec 1998 Vol. 6(2) : 187-190

Decolorization of kesinai (Streblus asper) leaf extract

Y.M.A. Idris1, A.M. Yazid2 and A.B. Sipat1*

1Department of Biochemistry and Microbiology; 2Department of Food Technology, Universiti Putra Malaysia, 43400 UPM, Serdang, Selangor D.E., Malaysia

(Received 14 April 1998 / Accepted 15 September 1998)

Abstract.
The kesinai (Streblus asper) leaf extract is known to contain a protease enzyme which can be used to coagulate milk. This extract however, has an undesirable dark brown color due to enzymatic browning. Several methods were used in an attempt to remove this color. Polyvinylpolypyrrolidone, at concentrations of up to 50% (w/v) in the extraction buffer reduced the color by up to 18%, while total phenols was decreased by 40%. Protease activity and milk coagulating activity (MCA) was increased by 30% and 37% respectively. Blanching, at 650C for 15 min, resulted in a 65% color and a 62% total phenol reduction, while protease activity and MCA were reduced by 60% and 70% respectively. Blanching at higher temperatures resulted in a better colored extract but enzyme specific activity and MCA losses were much higher. Column chromatography using silica, alumina, hydroxyapatite and charcoal was investigated. Silica and alumina gave the best results, in which both matrices lowered color by 41% and 50% respectively and the total phenol was reduced by 44% and 56% respectively while protease and MCA were not affected.

Keywords: Streblus asper, polyvinylpolypyrrolidone, decolorization

Abstract Characteristics of a dominant lignin peroxidase isoenzyme of Phanerochaete chrysosporium from solid state fermentation on rice husks

As. Pac. J. Mol. Biol. & Biotech., Dec 1998 Vol. 6(2) : 181-186

Characteristics of a dominant lignin peroxidase isoenzyme of Phanerochaete chrysosporium from solid state fermentation on rice husks

1. Darah, R. Burke and C. 0. Ibrahim

Fermentation and Enzyme Technology Laboratory, School of Biological Sciences, Universiti Sains Malaysia, 11800 Minden, Penang, Malaysia

(Received 13 July 1998 / Accepted 27 October 1998)

Abstract.
The lignin peroxidase of Phanerochaete chrysosporium was purified by means of ammonium sulphate precipitation and on an anion exchange chromatography, using a prepacked Mono Q column. The resolution from Mono Q column resulted in 6 different isoenzymes with the recovery of 51 % of which peak 5 (P5) was dominant with 29% recovery. P5 was purified about 23 folds with the specific activity of about 11.7 Umg 1 protein. The molecular weight of P5 was estimated to be 42,000 Dalton by SDS PAGE and the isoelectric point was at pl l 4.2. The optimum temperature and pH were 30 – 370C and 3.0, respectively. The isoenzyme was stable within the pH range of 2-4 and almost 70% of the enzyme activity was retained even after 48 h at 300C.

Keywords: lignin peroxidase, Phanerochaete chrysosporium, solid state fermentation, lignin peroxidase isoenzyme

Abstract A colourimetric dipstick colloidal dye immunoassay for rapid diagnosis of active cases of canine dirofilariasis

As. Pac. J. Mol. Biol. & Biotech., Dec 1998 Vol. 6(2) : 175-180

A colourimetric dipstick colloidal dye immunoassay for rapid diagnosis of active cases of canine dirofilariasis

Wan Omar Abdullah*, Low Kiat Cheong1, Vivian Jacob Gomes1, Sulaiman Osman1 and Yusof Suboh1

Department of Medical Sciences, Faculty of Medicine and Health Sciences, Universiti Putra Malaysia, 43400 UPM, Serdang, Selangor;
1Department of Parasitology and Medical Entomology, Faculty of Medicine, Universiti Kebangsaan Malaysia, Jalan Raja Muda Abdul Aziz, 50300 Kuala Lumpur

(Received 27 October 1997 / Accepted 16 June 1998)

Abstract.
The application of dispersed dye particles as label in immunological assay was investigated as an alternative to enzyme labeled immunoassay (ELISA). Dipsticks prepared from the antibody (Ab) coated nitrocellulose membrane mounted on acetate strips served as capture matrix. Ab absorbed to a commercial brilliant pink colloidal dye particles served as antigen (Ag) detecting reagent. The dipstick developed was compared with plate ELISA for detecting antigenemic cases of Dirofilaria immitis infection in dogs. Evaluation statistics of the dipstick assay varied according to the cutoff value of the ELISA titers. The overall specificity and sensitivity of ELISA was 96.67% and 98.57% respectively. The dipstick performed with a specificity of 85.71 % and a sensitivity of 94.12% when the ELISA titre was 160. There was high level of agreement between these two assay formats ranging from 89.47% to 92.60%. Dipstick assay detected 1% of the occult dirofiliariasis as with the plate ELISA. As the dipstick assay is simpler, rapid, inexpensive, equally sensitive and specific its use in detecting active cases of D. immitis infections in dogs is recommeded especially under field condition. The dipstick immunoassay format would enable veterinary practitioners to quickly diagnose and appropriately treat most cases of the disease.

Keywords: colourimetric, dipstick, inununoassay, dirofilariasis

Abstract Stability enhancement of protease by immobilization

As. Pac. J. Mol. Biol. & Biotech., Dec 1998 Vol. 6(2) : 171-174

Stability enhancement of protease by immobilization

A Chellapandian1 and C.A. Sastry2*

1Department of Bioengineering, Institute of Biotechnology, UNAM, Apdo 510 3 Cuernavaca, Morelos 62271, Mexico.
2Institute of Advanced Studies, University of Malaya, 50603 Kuala Lumpur, Malaysia.

(Received 18 February 1998 / Accepted 26 February 1998)

Abstract.
The stability of neutral and alkaline proteases immobilized on hexamethylene diamine coated vermiculite by covalent linkage using bifunctional reagent glutaraldehyde were investigated. Immobilized proteases showed an improved thermal and pH stability when compared to the free enzymes. The stability of the immobilized protease towards urea was studied both in the presence and absence of calcium chloride

Keywords: stability enhancement, protease, immobilization

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